Back up a little bit. So after some clarification, you are saying the car dies once the fans kick on, right? As Bob mentioned earlier, closed loop is programmed in the chip to activate once the car hits a particular temperature. In similar fashion, the fan(s) will kick on once the engine temperature reaches what is set in the chip, which will be a different temperature.
Would be helpful to know what chip you are running. Are there any modifications to the fan wiring from the stock configuration (i.e., is the fan resistor bypassed? Do the fan relays have jumper/bypass wires on them? What condition are the fan relays?) If I had to guess, I would venture to say that when the fan kicks on, the fans are drawing enough amperage that the voltage drops way down to a point that the ECM is going bonkers. I can't remember the threshold but I think if the ECM sees something like less than 10v, things will act up and can possibly shut the car down since the ECM can't operate properly. I suggest starting the car up and watching your voltage, paying particular attention to the voltage the moment the fan turns on.
Pics can speak volumes sometimes, so snap a few of the fan relays and the fan wiring if possible.