The contamination looks like oil residue. As in oil, after being "cooked".
Could be the intake is not seated on the heads. Once you pull the plenum, you will be able to look at the gasket joints at the heads. If it's the gasket, there'll be oil residue in the ports, and likely oil stain streaks on the intake runner walls, and cyl head port walls. And, if it's bad enuf, oil will be puddled on the backs of the intake valves.
Another source of oil is the turbo. Too much oil to it, and it'll leak past the seals.
STP.. I'd not use that as an additive for breakin.[ just my opinion]. I use 10w-40 DELO, and a can of EOS, in all my engines. [Breakin and after, as long as the engine is in service.] I reduce the EOS to 1/2 can, after breakin.
As for broken in?? Most rings seat in the first few minutes/miles. 500, and not seated?, they're not going to.
We run our engines on the dyno, at a low load, for 20-30 minutes, check everything, and drop the hammer. It's as good as it's gonna get.