Was the ending really that bad? As was said before, if you haven't seen the movie yet (and you didn't read previous postings to spoil it either) then stop reading. now!
The war ended (for now) and the fact that Neo & Trinity die isn't that big of a deal to me (everyone dies eventually, right?) It's funny to me the way "cinematic license" lets characters suffer mortal wounds that let them live just long enough to say all the last words that they want to say - as opposed to getting killed instantly, or continuing to live even as long as 1 minute or more after finally finishing whatever it happened to be that they wanted to say!
I was kinda hoping that Neo would discover that the "real" world would actually turn out to be a "2nd" matrix. How else would he have the power to knock out Sentinels, etc in the "real" world? If that was the real world, then mathematical anomolies would be irrelevant. Neo would
NOT be able to have any power in the real world! If he had been blinded, he would not have been able to "see" any of the "energy" that he could, in a very Matrix-like fashion, as well as be "jacked in" without actually
BEING "jacked in." But in this case, the answer is simple - that is the way the script writer chose to write the story.
I sort of liked the new idea that you can't see beyond a choice you don't understand, but was kinda dissapointed that the Oracle wasn't as powerful/omniscient as she was portrayed to be in M1.
Refresh my memory about when Neo was jacked in w/o actually being wired in? (When he was at the "train station?") And then how would you jack someone out if they weren't jacked in, in the first place?

Being at the train station seems like being "half jacked?" I mean, the trainmaster can pass between the Matrix and his rail network (along with Morpheous and Trinity) and has so much power that he can land a solid punch without Neo having any ability to react to it? And Neo forced himself into the train station by knocking out the sentinels? but then exited through the train, back to the Matrix and then unjacked into the "real world?"
I felt like they came close to making some good suggestions about "God" (as they portrayed the "Architect" in M2) although they didn't go any further with it in M3 - but I guess the script was up to someone else, huh?
It was interesting to me the way Smith started talking, saying "yes, you were laying right there, and then I say..." b/c it reminds myself sometimes of the way I experience "deja vue"
On an interesting note, Smith becomes like a virus himself(inserting himself into others) and replicating his number in this manner. Remember in M1 when Smith is talking to/interrogating Morpheous about humans not being mammals, but humans being more like a virus?
What other trilogies did you not like the way they ended?