I agree with what Mike said.
Earlier in post #74, you said fp was set to 42psi with vacuum line off. Is that still where it was set when you saw the knock?
In that 2nd screen shot, the 3* of knock shows at 3725 rpm, but your TPS is only at 3.16. Was this a WOT screen shot log? If so, you need to verify what the WOT TPS numbers are. If that was at WOT, I don't think 3.16 TPS is enough for the computer to trigger / engage power enrichment mode.
So do this.
Key on, car off, floor mat not under the gas pedal, floor it as hard as you can and report back what your WOT TPS number is.
One more question. Did you swap out the factory fuel filter? Located on the drivers side frame rail, almost center of the car under the door.
With you saying the fuel was a little bronzy in color, that makes me think that the fuel filter could be clogged and you have crude in the bottom of the tank. Swap out the fuel filter if you haven't already and the very next thing I would do is get a good / new fuel pump. With an unknown age or type pump in the tank, that would be mandatory maintenance if it were mine. Take your time and don't cross thread the fittings when reinstalling the new one. Also, pretty much any local parts store fuel filter will work. I prefer Wix or AC Delco, but have used Autozone's Duralast brand in the past without any issue.
And last question. What brand and octane of fuel are you running?
The tt5.7 chip will allow you to turn the timing down, as Mike said and will dramatically help driveability. I would definitely add it to your future list.
If you haven't swapped the fuel filter, just doing that will help some. You're doing everything right so far, and once the fuel system is squared away, you will be able to start upping the boost and making some power. Just gotta get the fuel system up to par first.
Let us know more about the knock event and if it happened at WOT, or just partial throttle acceleration.
-Patrick-