I asked earlier, were studs used? Possible you bottomed out on the stud and never got full clamping on the head in those spots.
We used head bolts not studs. It's possible that could have happened since the heads look a little short (don't know for sure yet) having them CC'd now. The block has been decked twice that I know of. I'm about .017 in the hole now with a Wiseco 5109A3. That's my crude measurement. We will get all the calculations and compute what compression I was running.
I have the receipt from 2004 when the heads were bought new. The car stayed with that owner until 2007. I don't think the car was actually finished until some time in 2006 based on receipts. With the mods the car had at that time they were heading to the 1/4 mile length of pavement. Motor to suspension. The story I got from the guy who bought the car in 2007 is that they never raced it. Just built it and decided to sell it. Once he took ownership he joined this board. I looked through all of his threads until I bought the car and no information about a head gasket failure or the motor coming apart so I figured the heads were virgin. He did have a thread about running too much boost without alky and was very worried. The he installed alky. He should have been worried because he repeatedly detonated the sh&t out of the motor. Ask me how I know.

Now some people have a little more vanity than others so rather than posting his error he may have had it fixed and kept quiet. Not me, when I do something stupid I tell someone smarter than me so I become less stupid. Makes sense to me.

Now we all know how long it takes to blow a head gasket so maybe somewhere in there the heads came off, got shaved and re-installed with no paper trail. However, the motor had .100 cometics on it when I took it apart. The question should be answered once we CC the heads. If they're short there's your answer. If they're not then maybe they were trying to lower compression for whatever reason?
My plan at this point is to CC the heads and make sure they're good to sell. I want the new owner to know where they stand on CC volume. My heads are done right. Springs, locks, retainers etc. I bought the best of everything. Valve job is done with new seals as well.
Going with T/A aluminums set up just like my current heads. Better springs; locks and retainers. Cometic gaskets and studs. I have no doubt that guys run the stock type gasket and get away with it. I never get away with anything so I'm not going risk it. I also may need a custom built head gasket to achieve a certain compression ratio so I may need a cometic anyway.
There are some plusses for me in this situation. I have learned a ton about my car. I no longer wonder about how it works under the hood. I know every nut and bolt personally. That's a good thing and I mean that sincerely. I have good friends willing to help that know how to help. I'll fix it and move on.