Update, installed the intake and seemed to fit great. Bolts lined up. Used the felpro gasket with sealant around the water ports and TQ'd it down. Put a pressure test to it today after sitting over night and it still leaks. I didn't fill the system up with coolant or water, I just put air pressure in at 17 psi.
I instantly heard air leaking out the PCV grommet and valve cover breather grommets. Getting air in the block.
I pulled the intake tonight and noticed a darker color on the blue felpro material around the water ports. Looked like I had good contact at the intake from gasket markings. The sealant seems to have made a good contact patch as well. I used yamabond 4 there.
I decided to do a test and see why the blue coating was a darker shade where I figured the intake was leaking. I did drain the block but there is still a little coolant in the system floating around under pressure so it would have found it's way to a source of the leak.
I first used just plain water and rubbed it on the blue coating on the felpro gasket and it evaporated back to normal. Then I rubbed 50/50 coolant on the gasket at it stayed dark. Then I tried the soapy water and it evaporated back to normal as well. I sprayed soapy water under pressure looking for air bubbles.
This tells me I had coolant leaking at the water ports from air in the system pushing it out. I sat the intake on the heads and checked for clearance issues the best I could. The alternator and turbo are in the way for a good view. From what I can see it seems to sit real nice.
With the block being decked twice and the heads once that I know of I may have an issue here. Plus the intake had 15 thousands taken off to make it true. I had no choice there, it needed done. I may just be too short on the intake at this point? I find that hard to swallow based on how good it fit and the gasket match but what else could be preventing me from sealing this thing up?
I'll post some pics tomorrow when I get to the shop. Maybe someone will see something I'm missing?